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MRG: Only process NIRX event files if they are present #7951

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merged 1 commit into from
Jul 2, 2020

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@rob-luke rob-luke commented Jul 1, 2020

What does this implement/fix?

In the event that no triggers are sent during a recording (for example a resting state measurement) the event file is not created. This PR only tries to create annotations if the event file is present.

Comment on lines 291 to 292
if op.isfile(files['hdr'][:-4]+'.evt'):
with _open(files['hdr'][:-4]+'.evt') as fid:
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Surround + with spaces. Also, you can re-use the dot from files['hdr'][:-3]. Bonus comment: using pathlib would expose the file stem and extension without having to do any string slicing (pathlib would actually be a better replacement for os.path - but this could be done in a separate PR).

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Thanks

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rob-luke commented Jul 2, 2020

@larsoner @agramfort could you please review

@rob-luke rob-luke changed the title WIP: Only process NIRX event files if they are present MRG: Only process NIRX event files if they are present Jul 2, 2020
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@larsoner merge if happy

@cbrnr cbrnr merged commit 5acdd58 into mne-tools:master Jul 2, 2020
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cbrnr commented Jul 2, 2020

Thanks @rob-luke!

larsoner added a commit to larsoner/mne-python that referenced this pull request Jul 8, 2020
* upstream/master: (30 commits)
  MRG: Add remove_labels to _Brain (mne-tools#7964)
  Add get_picked_points (mne-tools#7963)
  ENH: Add OpenGL info to mne sys_info (mne-tools#7976)
  [MRG] Fix reject_tmin and reject_tmax for reject_by_annotation in mne.Epochs (mne-tools#7967)
  mrg: Add scalar mult and div operators for AverageTFR (mne-tools#7957)
  MRG, MAINT: Cleaner workaround for Sphinx linking issue (mne-tools#7970)
  MRG, ENH: Speed up epochs.copy (mne-tools#7968)
  MRG, BUG: Allow ref mags to have a comp grade (mne-tools#7965)
  do not forget to pass adjacency (mne-tools#7961)
  [MRG] fix Issue with stc.project after restricting to a label (mne-tools#7950)
  Only process nirx event file if present (mne-tools#7951)
  MRG+1: BUG: info['bads'] order shouldn't matter in write_evokeds() (mne-tools#7954)
  Fix some small glitches introduced via mne-tools#7845 (mne-tools#7952)
  Add time player (mne-tools#7940)
  MAINT: Clean up VTK9 offset array [circle front] (mne-tools#7953)
  MAINT: Skip a few more on macOS (mne-tools#7948)
  fix links [skip travis] (mne-tools#7949)
  MRG, MAINT: Tweak CIs (mne-tools#7943)
  MRG, BUG: Fix vector scaling (mne-tools#7934)
  MRG, VIZ, BUG: handle CSD channel type when topo plotting (mne-tools#7935)
  ...
@rob-luke rob-luke deleted the nirxevt branch April 8, 2022 05:26
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3 participants