* Update broken link
* Remove redundancy for less maintainment

Fix broken link and minor update

#318)

* replaced all <use-mesh> tags by <receive-mesh> and <provide-mesh> tags in */precice-config.xml in order to make it compatible with current preCICE versions

* added changelog 318.md for this PR

* Update changelog-entries/318.md

Co-authored-by: David Schneider <david.schneider@ipvs.uni-stuttgart.de>

Co-authored-by: timo-schrader <timo-schrader>
Co-authored-by: David Schneider <david.schneider@ipvs.uni-stuttgart.de>

* adding fenicsx solver to partitioned-heat-equation tutorial

* Delete printStats.py

* cleanup work

* changed README.md

* output reference solution

* Changed output folder

* Remove mapping timings

* Add changelog entry

related to #301 (comment)

* Build cpp solvers as part of run

* Update elastic-tube-1d/fluid-cpp/run.sh

Co-authored-by: Gerasimos Chourdakis <chourdak@in.tum.de>

* Fix solid-cpp run

Co-authored-by: Gerasimos Chourdakis <chourdak@in.tum.de>

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Co-authored-by: Gerasimos Chourdakis <chourdak@in.tum.de>

Not maintained anymore.

Co-authored-by: Gerasimos Chourdakis <chourdak@in.tum.de>

…326)

Co-authored-by: Valentin Seitz <valentin.seitz@tum.de>
Co-authored-by: Gerasimos Chourdakis <chourdak@in.tum.de>

Co-authored-by: Valentin Seitz <valentin.seitz@tum.de>

* - Added fenics adapter
- straightend out the nameing of build_arguments to be more uniform around the code

* Update tools/tests/README.md

Co-authored-by: Gerasimos Chourdakis <chourdak@in.tum.de>

---------

Co-authored-by: Valentin Seitz <valentin.seitz@tum.de>
Co-authored-by: Gerasimos Chourdakis <chourdak@in.tum.de>

Co-authored-by: Valentin Seitz <valentin.seitz@tum.de>

Instead the docker container now runs a non root user by design of the container

Co-authored-by: Valentin Seitz <valentin.seitz@tum.de>

* moved completelty to new syntax, Fixed some bugs

* Introduce lfs filter for .tar.gz

* - Introduces correct return code
- Updated test syntax to include reference_results
- introduced working generation of reference results

* added reference data

* make autopep8 happy

* make check_md happy

* Update tools/tests/paths.py

Co-authored-by: Gerasimos Chourdakis <chourdak@in.tum.de>

* Delete nutils.Dockerfile

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Co-authored-by: Valentin Seitz <valentin.seitz@tum.de>
Co-authored-by: Gerasimos Chourdakis <chourdak@in.tum.de>

Co-authored-by: Gerasimos Chourdakis <chourdak@in.tum.de>

* Initial commit - add Nutils macro and micro participants

* Initial code for macro and micro cases with DuMux

* Add cmake file for compiling DuMux code

* Remove DuMux case for now

* Initial content in README and simplifying config scripts

* Use standard name of preCICE config

* Add cleaning script

* Add clean scripts for macro- and micro- Nutils

* Use copies of Nutils objects while getting the state

* Add image and modify clean-tutorial.sh

* Reducing computational time of the macro-micro case and adding content to README

* Making the case cheaper and finalizing README

* Formatting

* Update two-scale-heat-conduction/README.md

Co-authored-by: Gerasimos Chourdakis <chourdak@in.tum.de>

* Apply suggestions from code review

Co-authored-by: Gerasimos Chourdakis <chourdak@in.tum.de>

* Add run scripts for macro and micro Nutils participants

* Simplifying README and formatting precice-config

* Add tutorial prefix name to image filename

* Rename image file

* Add shebang in clean-tutorial.sh

* Use quotes while passing numbers of procs to run.sh

* Incorporating changes

* Add correct file relative paths

* Port case to v3

* Add results image in README and do some formatting

* Add results image

* Add micro simulation results and descriptions of outputs

* Change width of images in README

* Remove width parameter, it does not work

* Small typos

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Co-authored-by: Gerasimos Chourdakis <chourdak@in.tum.de>

* Added first working prototype

* added working fenics  adapter

* remove comments

* added working nutils "adapter"

* added not working calclulix -adapter

* reorder dockerfile

* make autopep8 happy

* fix print_case_combinations

* WIP

* WIP

* - Introduced logging instead of prints
- refactored into exceptions instead of exit(1)
-

* - Added Nutils
- Added Calculix
- Added reference results for some cases
- Added heat exchanger tutorial
- Added logging and more verbose output
- Added timing output

* Split building docker and running tutorial

* adopt to requested chnages:
- fallow-arguments vs std-legacy
- no nutils adapter, just install nutils

* - Adopt .md to .metadata
- generate new reference results

* - added overview table

* added script to only build dockers to warmup cache

* Update tools/tests/components.yaml

Co-authored-by: Gerasimos Chourdakis <chourdak@in.tum.de>

* make autpep8 happy

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Co-authored-by: Valentin Seitz <valentin.seitz@tum.de>
Co-authored-by: Gerasimos Chourdakis <chourdak@in.tum.de>

…(v3) (#333)

* Update all FEniCS participants to be compatible with precice:develop and fenics-adapter updates
* Change from thin plate splines mapping to general rbf mapping
* Update how dt is used.
* Store time in vtk files for better visualization.
* Partitioned heat conduction:
  * Fix config and case definition. (precice/precice#1610)
  * Use stricter error tolerance.

… tutorial.

Co-authored-by: Valentin Seitz <valentin.seitz@tum.de>

* Works now with latest commit precice/precice@eeed188 of preCICE and https://github.com/precice/python-bindings/releases/tag/v3.0.0.0dev2.

* Use sympy to generate FEniCS expressions

#392)

* adopt workflow to execute in vm

* try with strings and rigth inputs

* introduce flag to control upload of artifacts
Removing the helper workflow & renanming the reusable one

* Update .github/workflows/run_testsuite_manual.yml

Co-authored-by: Gerasimos Chourdakis <chourdak@in.tum.de>

* Update .github/workflows/run_testsuite_workflow.yml

Co-authored-by: Gerasimos Chourdakis <chourdak@in.tum.de>

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Co-authored-by: Valentin Seitz <valentin.seitz@tum.de>
Co-authored-by: Gerasimos Chourdakis <chourdak@in.tum.de>

See https://precice.discourse.group/t/problem-to-run-openfoam-in-parallel/1652

#281)

Co-authored-by: Valentin Seitz <valentin.seitz@tum.de>

* Lets try fetching everything
should not be that bad in general..

* map the origin branches locally and track them

* add docker tidy

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Co-authored-by: Valentin Seitz <valentin.seitz@tum.de>

…ial-base.sh

* Remove unnecessary clean_aste call from base cleaning

* Make clean_aste work on any directory

* Rephrase ASTE message

* Revert "Rephrase ASTE message"

This reverts commit 85ab387.

* Add clean.sh to aste-turbine tutorial, which calls the clean_aste function

* Check if clean.sh exists in the base tutorial folder, and if so, run it while cleaning the tutorial

* Add comment to code which checks if a clean.sh exists in the base tutorial folder, and if yes, runs it

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Co-authored-by: Gerasimos Chourdakis <chourdak@in.tum.de>

Co-authored-by: Valentin Seitz <valentin.seitz@tum.de>

Co-authored-by: Valentin Seitz <valentin.seitz@tum.de>

* add machine info to reference results

* rename script to unify naming

* add workflows

* make autopep happy and trigger wf once :)

* made wf callable

* remove push trigger

* added some switch case to check for the different names until changes propagate

* Fix non terminating timeouts (#421)

Co-authored-by: Valentin Seitz <valentin.seitz@tum.de>

* Systests/move to commits (#422)

* remove non working gha cache stuff

* Move to only commits in the dockerfile

---------

Co-authored-by: Valentin Seitz <valentin.seitz@tum.de>

* adopt new naming schema

* filter lscpu to hide vulnerabilities

* move to consistent naming schema

* Adding reference results from precice-tests vm

* Make autopep8

* make paths a bit nicer and easier to understand

* Update tools/tests/README.md

Co-authored-by: Gerasimos Chourdakis <chourdak@in.tum.de>

* Update tools/tests/README.md

Co-authored-by: Gerasimos Chourdakis <chourdak@in.tum.de>

* introduce variable instead of magic number 10

* added comment on very long rm instructions

---------

Co-authored-by: Valentin Seitz <valentin.seitz@tum.de>
Co-authored-by: preCICE Tests VM <tests@precice.org>
Co-authored-by: Gerasimos Chourdakis <chourdak@in.tum.de>

… and pull requests (#427)

* Run checks for markdown linting, pep8, and scripts only once for push and pull requests

* YAML formatting

Co-authored-by: Valentin Seitz <valentin.seitz@tum.de>
Co-authored-by: preCICE Tests VM <tests@precice.org>

… the check is incorrectly True.

Since this workflow is reusable and can be called my multiple repos and default value is ${{ github.repository }}. This poses a problem as the action will check out the calling repository, which is not what we want if the calling repo is e.g. the openfoam-adapter.

Port PR 431 from master to develop

Co-authored-by: Gertjan van Zwieten <gertjanvanzwieten@evalf.nl>